Network of connected components and modules

Software

GitHub: briochemc

Software I own (16)

  1. OceanTransportMatrixBuilder.jl: A Julia package to build ocean transport matrices from CMIP model output. Benoît Pasquier 2024 doi: 10.5281/zenodo.13864392
  2. AIBECS.jl: A tool for exploring global marine biogeochemical cycles Benoît Pasquier, François W. Primeau, Seth G. John 2019 doi: 10.5281/zenodo.2864051
  3. GNOM: An optimized steady-state model of the modern global marine neodymium cycle Benoît Pasquier, Sophia K. V. Hines, Hengdi Liang, Yingzhe Wu, Steven L. Goldstein, Seth G. John 2021 doi: 10.5281/zenodo.5651295
  4. WorldOceanAtlasTools.jl: Download and process World Ocean Data in Julia Benoît Pasquier 2019 doi: 10.5281/zenodo.2677666
  5. F1Method.jl: A julia package to autodifferentiate through a steady-state solver Benoît Pasquier 2019 doi: 10.5281/zenodo.2667835
  6. DualMatrixTools.jl: Efficiently solve dual-valued linear systems Benoît Pasquier 2018 doi: 10.5281/zenodo.1493571
  7. HyperDualMatrixTools.jl: Efficiently solve hyperdual-valued linear systems Benoît Pasquier 2018 doi: 10.5281/zenodo.1670841
  8. Inpaintings.jl Benoît Pasquier Julia version of MATLAB's inpaint_nans
  9. OceanographyCruises.jl Benoît Pasquier An interface for dealing with oceanographic cruises data
  10. OceanGrids.jl Benoît Pasquier Standard format of grids for AIBECS
  11. OceanBasins.jl Benoît Pasquier Programmatically determine which ocean basin a (lat,lon) coordinate is in
  12. GEOTRACES.jl Benoît Pasquier, Anshul Singhvi A package for reading and using GEOTRACES data in Julia
  13. BlockDiagonalFactors.jl Benoît Pasquier Efficiently solve linear block-diagonal systems with repeated blocks
  14. Earth2014.jl Benoît Pasquier, Yakir Luc Gagnon Download topographic data for the globe
  15. ACCESS-TMIP Benoît Pasquier Comparing diagnostics of water transport across ACCESS runs. doi: 10.5281/zenodo.17068271
  16. TMIP-code/notebooks Benoît Pasquier A place to explore and share TMIP-related Jupyter and Pluto notebooks. doi: 10.5281/zenodo.17068273

Software I contributed to (26)

  1. HyperDualNumbers.jl: Julia implementation of HyperDualNumbers Rob J. Goedman, Nicola, Benoît Pasquier, Timothy Holy, Alexander Ronald Altman, Christopher Rackauckas, Tony Kelman, Viral B. Shah, Jishnu Bhattacharya 2018 doi: 10.5281/zenodo.1660762
  2. Oceananigans.jl Ali Ramadhan, Gregory L. Wagner, Navid C. Constantinou, Simone Silvestri, Tomás Chor, Francis J. Poulin, Elise Palethorpe, Andre Nogueira Souza, Suyash Bire, Mosè Giordano, Henry Hongnan Guo, Victoria Whitley Clark, Jago Strong-Wright, Chris Hill, William Moses, Xin Kai Lee, Benoît Pasquier, and many contributors Julia software for fast, friendly, flexible, ocean-flavored fluid dynamics on CPUs and GPUs.
  3. UnitfulRecipes.jl Benoît Pasquier, David E Gustavsson, Jan Weidner, Jeff Fessler, Daniel Boland, Bart Janssens, Dilum Aluthge, Rafael Schouten, Claire Foster Plotting data with units seamlessly in Julia.
  4. Pardiso.jl Kristoffer Carlsson, Mikkel Paltorp, Jürgen Fuhrmann, William Sweeney, Benoît Pasquier, Pablo San-Jose, Lea Kapelevich, Viral B. Shah, Patrick Belliveau, Tony Kelman, Knut Andreas Meyer, Francesc Verdugo, Till Ehrengruber Calling the PARDISO library from Julia.
  5. OceanGreensFunctionMethods.jl G Jake Gebbie, Thomas Haine, Benoît Pasquier Green's Function Methods for Tracer Timescales and Pathways in Ocean Models.
  6. latexdiff Frederik Tilmann, Yarden Peleg, Benoît Pasquier, Joachim Protze, Tom de Geus, and many contributors Compares two latex files and marks up significant differences between them.
  7. YAXArrays.jl Fabian Gans, Felix Cremer, Lazaro Alonso, Guido Kraemer, Pavel V. Dimens, Daniel Loos, Daniel E. Pabon-Moreno, Martin Reinhardt, and many contributors Yet Another XArray-like Julia package.
  8. cmap Timothy Sipkens, Benoît Pasquier Perceptually uniform colormaps for MATLAB, compiled from multiple sources.
  9. Makie.jl Simon Danisch, Julius Krumbiegel, and many contributors Interactive data visualisations and plotting in Julia.
  10. offsetaxis-pkg Kelly Kearney, Benoît Pasquier OFFSETAXIS Add an x- or y-axis offset from the plotted axis area (MATLAB).
  11. GeoStats.jl Júlio Hoffimann, and many contributors Comprehensive framework for geostatistics (or spatial statistics).
  12. Plots.jl Tom Breloff1, and many contributors Powerful convenience for Julia visualisations and data analysis.
  13. Unitful.jl Andrew Keller, and many contributors Julia package for physical units.
  14. UnitfulMoles.jl Rafael Schouten, Benoît Pasquier Utilities for working with Mole units for the Julia language.
  15. Distributions.jl Dahua Lin, David Widmann, Simon Byrne, John Myles White, Andreas Noack, Mathieu Besançon, Douglas Bates, John Pearson, John Zito, Alex Arslan, Moritz Schauer, Kevin Squire, David Anthoff, Theodore Papamarkou, Jan Drugowitsch, Benjamin Deonovic, Avik Sengupta, Seth Axen, Brian J Smith, Glenn Moynihan, Giuseppe Ragusa, Martin O'Leary, Michael, Mohamed Tarek, Viral B. Shah, Christoph Dann, Mike J Innes, Tamas K. Papp, and many contributors A Julia package for probability distributions and associated functions.
  16. DiffEqBase.jl Christopher Rackauckas, Kanav Gupta, Yingbo Ma, Avik Pal, Jared Lumpe, David Widmann, Lilith Orion Hafner, Takafumi Arakaki, Daniel González Arribas, Oscar Smith, and many contributors DiffEqBase.jl is a component package in the DiffEq ecosystem.
  17. SciMLBase.jl Christopher Rackauckas, Aayush Sabharwal, Arno Strouwen, Qingyu Qu, Valentin Kaisermayer, Avik Pal, Vaibhav Kumar Dixit, Alex Jones, Oscar Smith, Lorenzo Van Munoz, Yingbo Ma, Sharan Yalburgi, Anshul Singhvi, and many contributors The Base interface of the SciML ecosystem.
  18. DiffEqOperators.jl Christopher Rackauckas, Alex Jones, ajozefiak, Shivin Srivastava, Valentin Sulzer, Mohammed Jeeshan Sheikh, Emmanuel Lujan, Yingbo Ma, Xingjian Guo, William Chen, and many contributors Linear operators for discretizations of differential equations and scientific machine learning (SciML).
  19. Interpolations.jl Tim Holy, Mark Kittisopikul, Alex Wadell, Tomas Aschan, Miles Lucas, Spencer Lyon, and many contributors Fast, continuous interpolation of discrete datasets in Julia.
  20. RecipesBase.jl Tom Breloff, Chris Rackauckas, Daniel Schwabeneder, Simon Christ, and many contributors Base package for defining transformation recipes on user types for Plots.jl.
  21. CMAP.jl Mohammad Ashkezari, Benoît Pasquier Simons CMAP Julia client.
  22. InverseDistanceWeighting.jl Júlio Hoffimann, Benoît Pasquier Inverse distance estimation solver for the GeoStats.jl framework.
  23. Format.jl Scott P. Jones, John M. Kuhn, Dahua Lin, tonyhffong, Yichao Yu, Alex Arslan, Tony Kelman, Iain Dunning, Oscar Dowson, Kevin Squire, Viral B. Shah, Ranjan Anantharaman, Tom Breloff, Joseph Kleinhenz, Chuan-Zheng Lee, Alexander Plavin, Benoît Pasquier, and many contributors A Julia package to provide C and Python-like formatting support.
  24. AndersonAcceleration Samar P. Khatiwala, Benoît Pasquier Anderson Acceleration for fixed point problems and spin-up of periodically-forced ocean models.
  25. payu Marshall Ward, Aidan Heerdegen, jo-basevi, Qianhui Chen, Spencer Wong, Dougie Squire, Anton Steketee, Nicholas Hoover, minghang.li, Bruno P. Kinoshita, Jasmeen Kaur, Phellipe Couto, Angus Gibson, Tommy Gatti, Manodeep Sinha, Andrew Kiss, Benoît Pasquier, and many contributors A workflow management tool for numerical models on the NCI computing systems.
  26. NonlinearSolve.jl Christopher Rackauckas, Avik Pal, Jadon Clugston, Yash Raj Singh, Simon Deltadahl, Qingyu Qu, Utkarsh, Flemming Holtorf, Arno Strouwen, Axel Larsson, RomeoV, Oscar Smith, Kanav Gupta, Yingbo Ma, Aayush Sabharwal, James Wrigley, Guillaume Dalle, Huiyu Xie, Ned Ganchovski, Daniel González Arribas, Aditya Pandey, Yonatan Delelegn, Vaibhav Dixit, Anant Thazhemadam, Dennis Ogiermann, Hendrik Ranocha, Fabian Gittins, Matt Bossart, David Barton, Songchen Tan, Tamas K. Papp, Benoît Pasquier, and many contributors High-performance and differentiation-enabled nonlinear solvers (Newton methods), bracketed rootfinding (bisection, Falsi), with sparsity and Newton-Krylov support.
CC BY-SA 4.0 Benoît Pasquier. Last modified: May 06, 2026. Website built with Franklin.jl and the Julia programming language. See this website's code on GitHub. (Inspired from Ronny Bergmann's website.)